Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC041040.2-201ENST00000622926 2899 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC136759.1-202ENST00000530858 2194 ntBASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00346Q8IVM7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00346Q8IVM7 AC012617.1-204ENST00000586340 2305 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC092135.3-201ENST00000624151 1846 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 TERF1P3-201ENST00000505638 1227 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC009486.1-201ENST00000569860 813 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC131212.3-201ENST00000624087 4219 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 PTENP1-202ENST00000532280 3996 ntBASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00346Q8IVM7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms