Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 AC140912.1-201ENST00000577171 1054 ntBASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 AC008494.3-201ENST00000606615 944 ntBASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.38□□□□□ -0.27
RFPL4BQ6ZWI9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AC087499.6-201ENST00000411576 835 ntBASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AL353779.1-201ENST00000434793 351 ntBASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AL662799.1-202ENST00000614205 422 ntBASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AC126365.1-201ENST00000578585 1514 ntBASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.37□□□□□ -0.27
RFPL4BQ6ZWI9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFPL4BQ6ZWI9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms