Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CES1P1-201ENST00000421606 1704 ntBASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXR1Q6PIV2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 SLC7A15P-201ENST00000424028 1363 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 TTTY23B-201ENST00000442790 549 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AC026979.3-201ENST00000607315 403 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MIR6805-201ENST00000615055 62 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AL589935.2-201ENST00000616471 1231 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 AL109936.8-201ENST00000641772 604 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 KRT8P24-201ENST00000560290 1559 ntBASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXR1Q6PIV2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 RPS2P32-201ENST00000439199 892 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AC093724.1-201ENST00000448659 1027 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AC055876.2-201ENST00000531834 546 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AL162274.1-201ENST00000617191 1098 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AC004461.2-201ENST00000629517 803 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AL033527.5-202ENST00000641632 1098 ntBASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXR1Q6PIV2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 AC073548.1-201ENST00000624088 1882 ntBASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 AL365181.3-201ENST00000605886 3222 ntBASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms