Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC099521.3-201ENST00000624251 2938 ntBASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC134915.1-201ENST00000426461 574 ntBASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 COL6A4P2-202ENST00000504443 2753 ntBASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AL049840.4-201ENST00000602422 811 ntBASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATPAF1Q5TC12 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 AC105206.1-202ENST00000314927 2368 ntBASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 TPT1P11-201ENST00000458482 498 ntBASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.91□□□□□ -0.34
ATPAF1Q5TC12 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms