Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC009090.5-201ENST00000624886 2285 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 OR2K2-202ENST00000374428 1038 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 AC092473.1-201ENST00000441098 221 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 AC012441.2-201ENST00000444843 739 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 KLF2P1-201ENST00000447438 1042 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 RN7SL67P-201ENST00000492147 296 ntBASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC025271.4-201ENST00000621477 1726 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 FAM90A2P-201ENST00000511144 1395 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 FAM90A25P-201ENST00000528404 1395 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 IGHV3-37-201ENST00000518544 340 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC005357.2-202ENST00000590507 1060 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC008805.1-201ENST00000590892 364 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC138696.2-201ENST00000607376 223 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 AC007718.1-201ENST00000621078 280 ntBASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTC1Q2NKJ3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 FGD5P1-202ENST00000614866 2498 ntBASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 AC009093.2-202ENST00000620513 2079 ntBASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTC1Q2NKJ3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.76■□□□□ 0.11
CTC1Q2NKJ3 INE2-201ENST00000630399 1874 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms