Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP7AQ04656 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP7AQ04656 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP7AQ04656 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 AL031673.1-201ENST00000611460 466 ntBASIC21.2■□□□□ 0.98
ATP7AQ04656 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.2■□□□□ 0.98
ATP7AQ04656 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP7AQ04656 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP7AQ04656 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP7AQ04656 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP7AQ04656 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ATP7AQ04656 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC215219.1-201ENST00000400706 1817 ntBASIC21.2■□□□□ 0.98
ATP7AQ04656 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ATP7AQ04656 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP7AQ04656 AC007950.2-201ENST00000615045 2347 ntBASIC21.2■□□□□ 0.98
ATP7AQ04656 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ATP7AQ04656 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC21.19■□□□□ 0.98
ATP7AQ04656 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP7AQ04656 AC093300.1-201ENST00000510368 1201 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 KNOP1P1-201ENST00000542108 989 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 AC026336.4-201ENST00000624565 1050 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP7AQ04656 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP7AQ04656 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
ATP7AQ04656 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP7AQ04656 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP7AQ04656 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
ATP7AQ04656 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 AGAP7P-201ENST00000582299 2062 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 AGAP14-201ENST00000624701 2060 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP7AQ04656 RN7SL288P-201ENST00000490496 291 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 IGHEP2-201ENST00000519308 1256 ntBASIC21.19■□□□□ 0.98
ATP7AQ04656 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ATP7AQ04656 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP7AQ04656 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP7AQ04656 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ATP7AQ04656 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP7AQ04656 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP7AQ04656 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP7AQ04656 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP7AQ04656 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP7AQ04656 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 AC092896.1-201ENST00000465850 380 ntBASIC21.18■□□□□ 0.98
ATP7AQ04656 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP7AQ04656 CES1P2-201ENST00000566467 1242 ntBASIC21.18■□□□□ 0.98
ATP7AQ04656 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP7AQ04656 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP7AQ04656 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP7AQ04656 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms