Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 AC004899.1-201ENST00000424687 1714 ntBASIC14.62□□□□□ -0.07
SRP54P61011 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 FAM58BP-201ENST00000439056 645 ntBASIC14.62□□□□□ -0.07
SRP54P61011 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.62□□□□□ -0.07
SRP54P61011 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.62□□□□□ -0.07
SRP54P61011 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.62□□□□□ -0.07
SRP54P61011 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 AC004923.1-202ENST00000642106 209 ntBASIC14.62□□□□□ -0.07
SRP54P61011 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SRP54P61011 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.62□□□□□ -0.07
SRP54P61011 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SRP54P61011 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP54P61011 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP54P61011 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SRP54P61011 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 IGHJ2P-201ENST00000454480 60 ntBASIC14.61□□□□□ -0.07
SRP54P61011 ALG3P1-201ENST00000508806 1114 ntBASIC14.61□□□□□ -0.07
SRP54P61011 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.61□□□□□ -0.07
SRP54P61011 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.61□□□□□ -0.07
SRP54P61011 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.61□□□□□ -0.07
SRP54P61011 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.61□□□□□ -0.07
SRP54P61011 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP54P61011 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP54P61011 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP54P61011 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms