Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AC108073.2-201ENST00000464002 357 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TMEM198B-204ENST00000484016 896 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 UNC93B6-202ENST00000528242 690 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AC034105.1-201ENST00000563488 319 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 INE2-201ENST00000630399 1874 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 PCDHB18P-202ENST00000526308 3197 ntBASIC11.59□□□□□ -0.55
ERVFC1-1P60608 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
ERVFC1-1P60608 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.58□□□□□ -0.55
ERVFC1-1P60608 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AC136604.1-201ENST00000418535 575 ntBASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AL139010.1-201ENST00000454878 894 ntBASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AC108751.1-201ENST00000490852 363 ntBASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 AC079781.4-201ENST00000641908 219 ntBASIC11.58□□□□□ -0.56
ERVFC1-1P60608 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ERVFC1-1P60608 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms