Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.89■□□□□ 0.13
VCPP55072 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCPP55072 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
VCPP55072 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.89■□□□□ 0.13
VCPP55072 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VCPP55072 AL161772.1-201ENST00000610494 4412 ntBASIC15.88■□□□□ 0.13
VCPP55072 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.88■□□□□ 0.13
VCPP55072 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.88■□□□□ 0.13
VCPP55072 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VCPP55072 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.88■□□□□ 0.13
VCPP55072 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
VCPP55072 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VCPP55072 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.88■□□□□ 0.13
VCPP55072 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
VCPP55072 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.88■□□□□ 0.13
VCPP55072 AC132938.4-201ENST00000623835 848 ntBASIC15.88■□□□□ 0.13
VCPP55072 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
VCPP55072 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VCPP55072 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.87■□□□□ 0.13
VCPP55072 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VCPP55072 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.87■□□□□ 0.13
VCPP55072 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.87■□□□□ 0.13
VCPP55072 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.87■□□□□ 0.13
VCPP55072 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VCPP55072 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.87■□□□□ 0.13
VCPP55072 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 AC007663.3-201ENST00000609632 465 ntBASIC15.87■□□□□ 0.13
VCPP55072 AP005019.2-201ENST00000615104 511 ntBASIC15.87■□□□□ 0.13
VCPP55072 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.87■□□□□ 0.13
VCPP55072 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 KRT8P35-201ENST00000483942 1338 ntBASIC15.87■□□□□ 0.13
VCPP55072 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.87■□□□□ 0.13
VCPP55072 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.87■□□□□ 0.13
VCPP55072 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VCPP55072 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.86■□□□□ 0.13
VCPP55072 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
VCPP55072 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.86■□□□□ 0.13
VCPP55072 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCPP55072 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.86■□□□□ 0.13
VCPP55072 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
VCPP55072 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.86■□□□□ 0.13
VCPP55072 NUP210P1-202ENST00000504322 710 ntBASIC15.86■□□□□ 0.13
VCPP55072 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.86■□□□□ 0.13
VCPP55072 KRT18P25-201ENST00000508931 1278 ntBASIC15.86■□□□□ 0.13
VCPP55072 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms