Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMSP52788 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 AC097359.2-201ENST00000604992 2389 ntBASIC13.95□□□□□ -0.18
SMSP52788 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 AC041040.2-201ENST00000622926 2899 ntBASIC13.95□□□□□ -0.18
SMSP52788 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 AC136759.1-202ENST00000530858 2194 ntBASIC13.95□□□□□ -0.18
SMSP52788 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
SMSP52788 AC104457.1-201ENST00000401024 814 ntBASIC13.95□□□□□ -0.18
SMSP52788 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.95□□□□□ -0.18
SMSP52788 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 AC108725.1-201ENST00000495472 409 ntBASIC13.95□□□□□ -0.18
SMSP52788 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.95□□□□□ -0.18
SMSP52788 AC091271.1-201ENST00000611877 1162 ntBASIC13.95□□□□□ -0.18
SMSP52788 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.95□□□□□ -0.18
SMSP52788 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.95□□□□□ -0.18
SMSP52788 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMSP52788 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.95□□□□□ -0.18
SMSP52788 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.94□□□□□ -0.18
SMSP52788 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.94□□□□□ -0.18
SMSP52788 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.94□□□□□ -0.18
SMSP52788 RN7SL560P-201ENST00000577943 264 ntBASIC13.94□□□□□ -0.18
SMSP52788 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 AC025181.2-201ENST00000606994 802 ntBASIC13.94□□□□□ -0.18
SMSP52788 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.94□□□□□ -0.18
SMSP52788 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 AC087386.2-201ENST00000623212 4637 ntBASIC13.94□□□□□ -0.18
SMSP52788 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.94□□□□□ -0.18
SMSP52788 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms