Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RNF144AP50876 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 AL645937.2-201ENST00000396808 931 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 NUS1P3-201ENST00000423502 862 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 AL590640.2-201ENST00000457038 527 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC068587.3-201ENST00000526613 355 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.84□□□□□ -0.19
RNF144AP50876 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.84□□□□□ -0.19
RNF144AP50876 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.84□□□□□ -0.19
RNF144AP50876 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.84□□□□□ -0.19
RNF144AP50876 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC020910.5-201ENST00000623668 1865 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC041040.2-201ENST00000622926 2899 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 HSPA7-201ENST00000445535 1927 ntBASIC13.84□□□□□ -0.19
RNF144AP50876 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.83□□□□□ -0.19
RNF144AP50876 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF144AP50876 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RNF144AP50876 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
RNF144AP50876 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RNF144AP50876 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.83□□□□□ -0.19
RNF144AP50876 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.83□□□□□ -0.19
RNF144AP50876 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 INE2-201ENST00000630399 1874 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 PTENP1-202ENST00000532280 3996 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RNF144AP50876 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 AL035696.2-201ENST00000407941 709 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF144AP50876 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
RNF144AP50876 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.83□□□□□ -0.2
RNF144AP50876 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.83□□□□□ -0.2
RNF144AP50876 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 DUX4L47-201ENST00000566374 394 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RNF144AP50876 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF144AP50876 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF144AP50876 BNIP3P41-202ENST00000616656 861 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 AC092723.2-201ENST00000624955 793 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 BEND3P1-201ENST00000421591 1944 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms