Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PGAM5P1-201ENST00000518923 814 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AL079307.3-201ENST00000556114 283 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX2-1P43699 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NKX2-1P43699 C20orf181-201ENST00000623918 480 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC005237.2-201ENST00000434368 219 ntBASIC12.17□□□□□ -0.46
NKX2-1P43699 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 DNAJB3-201ENST00000446806 729 ntBASIC12.17□□□□□ -0.46
NKX2-1P43699 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC026150.2-201ENST00000564693 1156 ntBASIC12.17□□□□□ -0.46
NKX2-1P43699 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.17□□□□□ -0.46
NKX2-1P43699 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 LINC01115-203ENST00000606068 577 ntBASIC12.17□□□□□ -0.46
NKX2-1P43699 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC111170.3-201ENST00000624282 2464 ntBASIC12.17□□□□□ -0.46
NKX2-1P43699 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NKX2-1P43699 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX2-1P43699 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX2-1P43699 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-1P43699 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NKX2-1P43699 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-1P43699 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-1P43699 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms