Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CKS2P33552 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 AL360270.3-201ENST00000609118 1348 ntBASIC10.93□□□□□ -0.66
CKS2P33552 CICP16-201ENST00000502609 2813 ntBASIC10.93□□□□□ -0.66
CKS2P33552 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 AC083964.2-201ENST00000623988 2396 ntBASIC10.93□□□□□ -0.66
CKS2P33552 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 MIR346-201ENST00000362234 95 ntBASIC10.93□□□□□ -0.66
CKS2P33552 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
CKS2P33552 AL353705.2-201ENST00000428243 662 ntBASIC10.93□□□□□ -0.66
CKS2P33552 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 RN7SL589P-201ENST00000481268 310 ntBASIC10.93□□□□□ -0.66
CKS2P33552 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.93□□□□□ -0.66
CKS2P33552 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.93□□□□□ -0.66
CKS2P33552 RNA5SP415-201ENST00000517246 115 ntBASIC10.93□□□□□ -0.66
CKS2P33552 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 AC106730.1-201ENST00000566722 1090 ntBASIC10.93□□□□□ -0.66
CKS2P33552 AC148477.8-201ENST00000624298 468 ntBASIC10.93□□□□□ -0.66
CKS2P33552 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 AP3S2-216ENST00000617003 1561 ntBASIC10.93□□□□□ -0.66
CKS2P33552 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CKS2P33552 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.93□□□□□ -0.66
CKS2P33552 AC004241.5-201ENST00000623870 2448 ntBASIC10.93□□□□□ -0.66
CKS2P33552 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CKS2P33552 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CKS2P33552 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CKS2P33552 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.92□□□□□ -0.66
CKS2P33552 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CKS2P33552 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms