Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CTGFP29279 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
CTGFP29279 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 AC026691.1-201ENST00000602502 2017 ntBASIC16.23■□□□□ 0.19
CTGFP29279 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 KRT8P18-201ENST00000413425 1445 ntBASIC16.23■□□□□ 0.19
CTGFP29279 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.23■□□□□ 0.19
CTGFP29279 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 RPL3P5-201ENST00000441645 1232 ntBASIC16.23■□□□□ 0.19
CTGFP29279 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 AL590235.1-201ENST00000564650 861 ntBASIC16.23■□□□□ 0.19
CTGFP29279 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.23■□□□□ 0.19
CTGFP29279 AL009176.1-201ENST00000607876 650 ntBASIC16.23■□□□□ 0.19
CTGFP29279 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.23■□□□□ 0.19
CTGFP29279 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.23■□□□□ 0.19
CTGFP29279 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.23■□□□□ 0.19
CTGFP29279 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTGFP29279 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.22■□□□□ 0.19
CTGFP29279 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 GEMIN8P4-201ENST00000380526 729 ntBASIC16.22■□□□□ 0.19
CTGFP29279 OR7E115P-201ENST00000382617 1024 ntBASIC16.22■□□□□ 0.19
CTGFP29279 PGAM1P11-201ENST00000416729 680 ntBASIC16.22■□□□□ 0.19
CTGFP29279 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 AL080243.1-201ENST00000423293 1060 ntBASIC16.22■□□□□ 0.19
CTGFP29279 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.22■□□□□ 0.19
CTGFP29279 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.22■□□□□ 0.19
CTGFP29279 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.22■□□□□ 0.19
CTGFP29279 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 AP005264.5-201ENST00000590066 467 ntBASIC16.22■□□□□ 0.19
CTGFP29279 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.22■□□□□ 0.19
CTGFP29279 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.22■□□□□ 0.19
CTGFP29279 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTGFP29279 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.22■□□□□ 0.19
CTGFP29279 AL365181.1-201ENST00000564032 1828 ntBASIC16.22■□□□□ 0.19
CTGFP29279 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTGFP29279 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.21■□□□□ 0.19
CTGFP29279 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTGFP29279 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTGFP29279 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms