Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.5□□□□□ -0.41
COL8A2P25067 BNIP3P13-201ENST00000599968 566 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 AC008825.2-201ENST00000603374 718 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 BX088702.1-201ENST00000610784 235 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 AC004923.1-202ENST00000642106 209 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 AC099063.4-201ENST00000641099 1602 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
COL8A2P25067 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COL8A2P25067 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
COL8A2P25067 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
COL8A2P25067 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.49□□□□□ -0.41
COL8A2P25067 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 AC004899.1-201ENST00000424687 1714 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
COL8A2P25067 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COL8A2P25067 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.49□□□□□ -0.41
COL8A2P25067 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 TUBB8P8-201ENST00000458717 1058 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 RN7SL163P-201ENST00000583100 276 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.49□□□□□ -0.41
COL8A2P25067 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.49□□□□□ -0.41
COL8A2P25067 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 LINC01230-201ENST00000625222 3017 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
COL8A2P25067 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COL8A2P25067 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 AC013726.1-201ENST00000563747 2285 ntBASIC12.49□□□□□ -0.41
COL8A2P25067 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL8A2P25067 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
COL8A2P25067 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 AC007292.2-201ENST00000593524 1812 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms