Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 FAM90A11P-201ENST00000518378 2218 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TMPOP1-202ENST00000424642 1267 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 ATP5G2P1-201ENST00000433580 426 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.42□□□□□ -0.58
RAB4AP20338 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 TMEM198B-204ENST00000484016 896 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC11.42□□□□□ -0.58
RAB4AP20338 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.42□□□□□ -0.58
RAB4AP20338 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 CICP1-201ENST00000416803 2410 ntBASIC11.42□□□□□ -0.58
RAB4AP20338 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
RAB4AP20338 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB4AP20338 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
RAB4AP20338 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB4AP20338 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 AP002761.4-201ENST00000565433 3361 ntBASIC11.41□□□□□ -0.58
RAB4AP20338 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 AC012531.1-201ENST00000562848 2680 ntBASIC11.41□□□□□ -0.58
RAB4AP20338 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 AC092474.2-201ENST00000424288 719 ntBASIC11.41□□□□□ -0.58
RAB4AP20338 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.41□□□□□ -0.58
RAB4AP20338 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.41□□□□□ -0.58
RAB4AP20338 AL009183.1-201ENST00000603760 355 ntBASIC11.41□□□□□ -0.58
RAB4AP20338 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
RAB4AP20338 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
RAB4AP20338 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RAB4AP20338 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms