Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB3BP20337 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 MKNK2P1-201ENST00000437526 628 ntBASIC13.02□□□□□ -0.33
RAB3BP20337 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB3BP20337 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB3BP20337 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB3BP20337 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 AC022145.2-201ENST00000598203 171 ntBASIC13.02□□□□□ -0.33
RAB3BP20337 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB3BP20337 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB3BP20337 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB3BP20337 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 AL158070.2-201ENST00000623713 1621 ntBASIC13.02□□□□□ -0.33
RAB3BP20337 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
RAB3BP20337 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB3BP20337 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAB3BP20337 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 SPDYE14P-201ENST00000442619 822 ntBASIC13.01□□□□□ -0.33
RAB3BP20337 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.01□□□□□ -0.33
RAB3BP20337 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 AC092364.2-202ENST00000597012 1073 ntBASIC13.01□□□□□ -0.33
RAB3BP20337 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB3BP20337 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB3BP20337 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
RAB3BP20337 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB3BP20337 MIR497HG-202ENST00000572453 3838 ntBASIC13.01□□□□□ -0.33
RAB3BP20337 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms