Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 AP001889.1-201ENST00000525414 633 ntBASIC13.53□□□□□ -0.24
CD53P19397 AC068587.3-201ENST00000526613 355 ntBASIC13.53□□□□□ -0.24
CD53P19397 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CD53P19397 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.53□□□□□ -0.24
CD53P19397 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.53□□□□□ -0.24
CD53P19397 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD53P19397 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.52□□□□□ -0.24
CD53P19397 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 AL031432.4-201ENST00000641729 2190 ntBASIC13.52□□□□□ -0.24
CD53P19397 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
CD53P19397 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.52□□□□□ -0.24
CD53P19397 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD53P19397 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD53P19397 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CD53P19397 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 TARDBPP1-201ENST00000442013 1203 ntBASIC13.52□□□□□ -0.25
CD53P19397 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 AC108725.1-201ENST00000495472 409 ntBASIC13.52□□□□□ -0.25
CD53P19397 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.52□□□□□ -0.25
CD53P19397 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 AP000812.2-201ENST00000538934 718 ntBASIC13.52□□□□□ -0.25
CD53P19397 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.52□□□□□ -0.25
CD53P19397 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 LILRP1-201ENST00000444199 1370 ntBASIC13.52□□□□□ -0.25
CD53P19397 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CD53P19397 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms