Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.37■□□□□ 0.85
LAMC1P11047 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LAMC1P11047 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
LAMC1P11047 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
LAMC1P11047 TUBB8P4-201ENST00000511806 1324 ntBASIC20.37■□□□□ 0.85
LAMC1P11047 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 HIST2H2BA-201ENST00000412169 381 ntBASIC20.37■□□□□ 0.85
LAMC1P11047 AL592076.1-201ENST00000424448 303 ntBASIC20.37■□□□□ 0.85
LAMC1P11047 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.37■□□□□ 0.85
LAMC1P11047 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.37■□□□□ 0.85
LAMC1P11047 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.37■□□□□ 0.85
LAMC1P11047 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.37■□□□□ 0.85
LAMC1P11047 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.37■□□□□ 0.85
LAMC1P11047 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.37■□□□□ 0.85
LAMC1P11047 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.37■□□□□ 0.85
LAMC1P11047 AC138466.4-201ENST00000623965 852 ntBASIC20.37■□□□□ 0.85
LAMC1P11047 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LAMC1P11047 AC020910.6-201ENST00000623084 1459 ntBASIC20.37■□□□□ 0.85
LAMC1P11047 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMC1P11047 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.37■□□□□ 0.85
LAMC1P11047 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.36■□□□□ 0.85
LAMC1P11047 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.36■□□□□ 0.85
LAMC1P11047 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMC1P11047 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.36■□□□□ 0.85
LAMC1P11047 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMC1P11047 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 AC098934.1-203ENST00000442868 1262 ntBASIC20.36■□□□□ 0.85
LAMC1P11047 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC20.36■□□□□ 0.85
LAMC1P11047 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LAMC1P11047 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMC1P11047 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC20.36■□□□□ 0.85
LAMC1P11047 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LAMC1P11047 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMC1P11047 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMC1P11047 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMC1P11047 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LAMC1P11047 PYY2-201ENST00000315776 282 ntBASIC20.35■□□□□ 0.85
LAMC1P11047 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMC1P11047 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMC1P11047 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.35■□□□□ 0.85
LAMC1P11047 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
LAMC1P11047 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.35■□□□□ 0.85
LAMC1P11047 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
LAMC1P11047 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMC1P11047 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMC1P11047 RN7SKP109-201ENST00000410592 316 ntBASIC20.35■□□□□ 0.85
LAMC1P11047 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
LAMC1P11047 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.35■□□□□ 0.85
LAMC1P11047 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.35■□□□□ 0.85
LAMC1P11047 EIF5AP2-201ENST00000585668 1047 ntBASIC20.35■□□□□ 0.85
LAMC1P11047 AL133467.4-201ENST00000602953 725 ntBASIC20.35■□□□□ 0.85
LAMC1P11047 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMC1P11047 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC20.34■□□□□ 0.85
LAMC1P11047 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.34■□□□□ 0.85
LAMC1P11047 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.34■□□□□ 0.85
LAMC1P11047 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.34■□□□□ 0.85
LAMC1P11047 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms