Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MIR6720-201ENST00000611664 98 ntBASIC13.5□□□□□ -0.25
P04436 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.5□□□□□ -0.25
P04436 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.5□□□□□ -0.25
P04436 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.5□□□□□ -0.25
P04436 AC004923.1-202ENST00000642106 209 ntBASIC13.5□□□□□ -0.25
P04436 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 AC018442.1-201ENST00000421439 2061 ntBASIC13.5□□□□□ -0.25
P04436 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.5□□□□□ -0.25
P04436 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P04436 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P04436 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P04436 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
P04436 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 AC004899.1-201ENST00000424687 1714 ntBASIC13.5□□□□□ -0.25
P04436 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
P04436 AC244394.1-201ENST00000435000 1665 ntBASIC13.5□□□□□ -0.25
P04436 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04436 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P04436 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P04436 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
P04436 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.49□□□□□ -0.25
P04436 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.49□□□□□ -0.25
P04436 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
P04436 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.49□□□□□ -0.25
P04436 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
P04436 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
P04436 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.49□□□□□ -0.25
P04436 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
P04436 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P04436 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 FNTAP2-201ENST00000430308 634 ntBASIC13.49□□□□□ -0.25
P04436 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.49□□□□□ -0.25
P04436 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.49□□□□□ -0.25
P04436 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.49□□□□□ -0.25
P04436 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.49□□□□□ -0.25
P04436 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.49□□□□□ -0.25
P04436 AL596257.1-201ENST00000641463 2694 ntBASIC13.49□□□□□ -0.25
P04436 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
P04436 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04436 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P04436 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
P04436 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P04436 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04436 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.48□□□□□ -0.25
P04436 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04436 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
P04436 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04436 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04436 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04436 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
P04436 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.48□□□□□ -0.25
P04436 BCYRN1-201ENST00000418539 200 ntBASIC13.48□□□□□ -0.25
P04436 CALR4P-201ENST00000431943 946 ntBASIC13.48□□□□□ -0.25
P04436 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms