Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.75□□□□□ -0.53
IFNA1P01562 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.75□□□□□ -0.53
IFNA1P01562 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.75□□□□□ -0.53
IFNA1P01562 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.75□□□□□ -0.53
IFNA1P01562 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 AC025181.2-201ENST00000606994 802 ntBASIC11.75□□□□□ -0.53
IFNA1P01562 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.75□□□□□ -0.53
IFNA1P01562 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
IFNA1P01562 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 AC090643.2-201ENST00000623442 2029 ntBASIC11.75□□□□□ -0.53
IFNA1P01562 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.75□□□□□ -0.53
IFNA1P01562 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
IFNA1P01562 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.75□□□□□ -0.53
IFNA1P01562 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.75□□□□□ -0.53
IFNA1P01562 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.75□□□□□ -0.53
IFNA1P01562 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
IFNA1P01562 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
IFNA1P01562 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 HLA-H-201ENST00000383620 1096 ntBASIC11.74□□□□□ -0.53
IFNA1P01562 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
IFNA1P01562 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 AL121772.3-201ENST00000610840 674 ntBASIC11.74□□□□□ -0.53
IFNA1P01562 AC092119.3-201ENST00000612618 583 ntBASIC11.74□□□□□ -0.53
IFNA1P01562 NPAP1P7-201ENST00000613027 823 ntBASIC11.74□□□□□ -0.53
IFNA1P01562 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.74□□□□□ -0.53
IFNA1P01562 CLK3P2-201ENST00000427566 1453 ntBASIC11.74□□□□□ -0.53
IFNA1P01562 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
IFNA1P01562 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.74□□□□□ -0.53
IFNA1P01562 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.74□□□□□ -0.53
IFNA1P01562 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
IFNA1P01562 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms