Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LTAP01374 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.17□□□□□ -0.62
LTAP01374 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 DMBT1P1-203ENST00000636837 4628 ntBASIC11.17□□□□□ -0.62
LTAP01374 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.17□□□□□ -0.62
LTAP01374 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LTAP01374 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.17□□□□□ -0.62
LTAP01374 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
LTAP01374 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LTAP01374 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LTAP01374 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 AL031595.1-201ENST00000623969 4709 ntBASIC11.16□□□□□ -0.62
LTAP01374 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 TUBB8P4-201ENST00000511806 1324 ntBASIC11.16□□□□□ -0.62
LTAP01374 MRPL37P1-201ENST00000592451 1337 ntBASIC11.16□□□□□ -0.62
LTAP01374 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
LTAP01374 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
LTAP01374 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 AC004461.1-201ENST00000412461 403 ntBASIC11.16□□□□□ -0.62
LTAP01374 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 AC007969.1-201ENST00000433675 447 ntBASIC11.16□□□□□ -0.62
LTAP01374 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.16□□□□□ -0.62
LTAP01374 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LTAP01374 MTDHP5-201ENST00000598980 586 ntBASIC11.16□□□□□ -0.62
LTAP01374 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LTAP01374 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LTAP01374 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LTAP01374 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms