Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC022447.6-201ENST00000515522 438 ntBASIC17.56■□□□□ 0.4
MBD4O95243 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD4O95243 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 RBM8B-201ENST00000555532 525 ntBASIC17.56■□□□□ 0.4
MBD4O95243 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.56■□□□□ 0.4
MBD4O95243 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.56■□□□□ 0.4
MBD4O95243 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.56■□□□□ 0.4
MBD4O95243 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 AGGF1P1-201ENST00000509500 2073 ntBASIC17.56■□□□□ 0.4
MBD4O95243 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MBD4O95243 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MBD4O95243 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.55■□□□□ 0.4
MBD4O95243 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.55■□□□□ 0.4
MBD4O95243 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MBD4O95243 AP000346.4-201ENST00000614827 381 ntBASIC17.55■□□□□ 0.4
MBD4O95243 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MBD4O95243 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD4O95243 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD4O95243 AC063926.3-201ENST00000624734 5658 ntBASIC17.54■□□□□ 0.4
MBD4O95243 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MBD4O95243 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MBD4O95243 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 MARK2P5-201ENST00000507649 634 ntBASIC17.54■□□□□ 0.4
MBD4O95243 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD4O95243 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.54■□□□□ 0.4
MBD4O95243 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.54■□□□□ 0.4
MBD4O95243 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 NDUFV2P1-201ENST00000596415 907 ntBASIC17.54■□□□□ 0.4
MBD4O95243 AC026740.1-201ENST00000607068 791 ntBASIC17.54■□□□□ 0.4
MBD4O95243 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD4O95243 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MBD4O95243 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
MBD4O95243 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD4O95243 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms