Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.2□□□□□ -0.3
ALX3O95076 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ALX3O95076 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.2□□□□□ -0.3
ALX3O95076 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.2□□□□□ -0.3
ALX3O95076 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.2□□□□□ -0.3
ALX3O95076 AC093028.1-201ENST00000622998 982 ntBASIC13.2□□□□□ -0.3
ALX3O95076 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ALX3O95076 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.2□□□□□ -0.3
ALX3O95076 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.2□□□□□ -0.3
ALX3O95076 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ALX3O95076 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ALX3O95076 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ALX3O95076 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ALX3O95076 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.19□□□□□ -0.3
ALX3O95076 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 AC087499.5-201ENST00000452760 1342 ntBASIC13.19□□□□□ -0.3
ALX3O95076 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 MTHFR-210ENST00000641407 2387 ntBASIC13.19□□□□□ -0.3
ALX3O95076 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.19□□□□□ -0.3
ALX3O95076 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.19□□□□□ -0.3
ALX3O95076 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 AC022494.1-201ENST00000466044 728 ntBASIC13.19□□□□□ -0.3
ALX3O95076 AC004066.1-201ENST00000502488 802 ntBASIC13.19□□□□□ -0.3
ALX3O95076 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.19□□□□□ -0.3
ALX3O95076 AC004449.1-201ENST00000564240 433 ntBASIC13.19□□□□□ -0.3
ALX3O95076 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.19□□□□□ -0.3
ALX3O95076 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 AL138828.2-201ENST00000615812 383 ntBASIC13.19□□□□□ -0.3
ALX3O95076 AC093512.1-201ENST00000617969 520 ntBASIC13.19□□□□□ -0.3
ALX3O95076 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
ALX3O95076 LILRP1-201ENST00000444199 1370 ntBASIC13.19□□□□□ -0.3
ALX3O95076 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.19□□□□□ -0.3
ALX3O95076 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ALX3O95076 VENTXP1-201ENST00000569334 2716 ntBASIC13.19□□□□□ -0.3
ALX3O95076 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALX3O95076 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.18□□□□□ -0.3
ALX3O95076 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ALX3O95076 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms