Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
USH2AO75445 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 MESTP4-201ENST00000412333 1204 ntBASIC6.37□□□□□ -1.39
USH2AO75445 PHBP10-201ENST00000416467 784 ntBASIC6.37□□□□□ -1.39
USH2AO75445 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 AL450346.2-201ENST00000495602 1024 ntBASIC6.37□□□□□ -1.39
USH2AO75445 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC6.37□□□□□ -1.39
USH2AO75445 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 PAX6-247ENST00000638965 979 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 MARS-233ENST00000628866 2583 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 SALL4P5-201ENST00000419001 1760 ntBASIC6.37□□□□□ -1.39
USH2AO75445 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 RPL3P2-204ENST00000413027 1203 ntBASIC6.37□□□□□ -1.39
USH2AO75445 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 AC104117.4-201ENST00000521486 847 ntBASIC6.37□□□□□ -1.39
USH2AO75445 RN7SL556P-201ENST00000582856 298 ntBASIC6.37□□□□□ -1.39
USH2AO75445 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC6.37□□□□□ -1.39
USH2AO75445 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 SIGLEC22P-201ENST00000599104 714 ntBASIC6.37□□□□□ -1.39
USH2AO75445 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 AC092903.1-201ENST00000466506 262 ntBASIC6.37□□□□□ -1.39
USH2AO75445 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 AC005332.2-201ENST00000590010 930 ntBASIC6.37□□□□□ -1.39
USH2AO75445 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC6.37□□□□□ -1.39
USH2AO75445 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC6.37□□□□□ -1.39
USH2AO75445 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC6.37□□□□□ -1.39
USH2AO75445 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC6.37□□□□□ -1.39
USH2AO75445 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 RN7SL322P-201ENST00000583519 299 ntBASIC6.37□□□□□ -1.39
USH2AO75445 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
USH2AO75445 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 AL137244.1-201ENST00000422931 865 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms