Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PRAMEF2O60811 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PRAMEF2O60811 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.94□□□□□ -0.18
PRAMEF2O60811 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 AC015818.8-201ENST00000587907 1519 ntBASIC13.94□□□□□ -0.18
PRAMEF2O60811 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 AC005089.1-201ENST00000619486 2241 ntBASIC13.94□□□□□ -0.18
PRAMEF2O60811 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRAMEF2O60811 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PRAMEF2O60811 AL138725.1-201ENST00000407347 1314 ntBASIC13.93□□□□□ -0.18
PRAMEF2O60811 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CNN2P10-201ENST00000443067 918 ntBASIC13.93□□□□□ -0.18
PRAMEF2O60811 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 C2orf69P2-201ENST00000562032 1123 ntBASIC13.93□□□□□ -0.18
PRAMEF2O60811 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 AC138696.2-201ENST00000607376 223 ntBASIC13.93□□□□□ -0.18
PRAMEF2O60811 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRAMEF2O60811 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PRAMEF2O60811 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 MTHFR-210ENST00000641407 2387 ntBASIC13.92□□□□□ -0.18
PRAMEF2O60811 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 FAM8A4P-201ENST00000435433 1213 ntBASIC13.92□□□□□ -0.18
PRAMEF2O60811 AL591846.1-201ENST00000451736 433 ntBASIC13.92□□□□□ -0.18
PRAMEF2O60811 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC084346.2-201ENST00000607097 949 ntBASIC13.92□□□□□ -0.18
PRAMEF2O60811 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.92□□□□□ -0.18
PRAMEF2O60811 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PRAMEF2O60811 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms