Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 AC139712.1-201ENST00000378256 1875 ntBASIC14.1□□□□□ -0.15
DUX1O43812 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
DUX1O43812 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
DUX1O43812 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.1□□□□□ -0.15
DUX1O43812 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.1□□□□□ -0.15
DUX1O43812 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.1□□□□□ -0.15
DUX1O43812 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.1□□□□□ -0.15
DUX1O43812 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 AC116345.2-201ENST00000512837 523 ntBASIC14.1□□□□□ -0.15
DUX1O43812 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 AL133499.1-201ENST00000596207 608 ntBASIC14.1□□□□□ -0.15
DUX1O43812 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.1□□□□□ -0.15
DUX1O43812 SPCS2P2-201ENST00000603270 608 ntBASIC14.1□□□□□ -0.15
DUX1O43812 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.1□□□□□ -0.15
DUX1O43812 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 FRMPD2B-201ENST00000431305 1347 ntBASIC14.1□□□□□ -0.15
DUX1O43812 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX1O43812 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX1O43812 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 AC018629.1-201ENST00000623381 1736 ntBASIC14.1□□□□□ -0.15
DUX1O43812 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX1O43812 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX1O43812 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX1O43812 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX1O43812 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 XBP1P1-201ENST00000436573 652 ntBASIC14.09□□□□□ -0.15
DUX1O43812 EEF1DP6-201ENST00000449232 372 ntBASIC14.09□□□□□ -0.15
DUX1O43812 AC073150.1-201ENST00000450406 1084 ntBASIC14.09□□□□□ -0.15
DUX1O43812 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.09□□□□□ -0.15
DUX1O43812 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.09□□□□□ -0.15
DUX1O43812 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.09□□□□□ -0.15
DUX1O43812 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.09□□□□□ -0.15
DUX1O43812 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
DUX1O43812 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX1O43812 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.09□□□□□ -0.15
DUX1O43812 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms