Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC15.3■□□□□ 0.04
TNRC18O15417 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC15.3■□□□□ 0.04
TNRC18O15417 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TNRC18O15417 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.3■□□□□ 0.04
TNRC18O15417 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TNRC18O15417 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
TNRC18O15417 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.3■□□□□ 0.04
TNRC18O15417 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC15.3■□□□□ 0.04
TNRC18O15417 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC15.3■□□□□ 0.04
TNRC18O15417 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC15.3■□□□□ 0.04
TNRC18O15417 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.3■□□□□ 0.04
TNRC18O15417 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC18O15417 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC15.29■□□□□ 0.04
TNRC18O15417 KRT18P42-201ENST00000505048 1255 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC18O15417 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC18O15417 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 AC136475.7-201ENST00000602949 592 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TNRC18O15417 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 AC064801.2-201ENST00000625052 1303 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 TFAM-201ENST00000373895 973 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC18O15417 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 RPL3P9-201ENST00000463217 1183 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 AC016304.1-201ENST00000476363 413 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC18O15417 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC18O15417 AC093462.1-201ENST00000621167 1683 ntBASIC15.29■□□□□ 0.04
TNRC18O15417 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC18O15417 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 BX679664.3-201ENST00000414070 555 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 GGT8P-201ENST00000418938 532 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 AC113935.1-201ENST00000471722 555 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC15.28■□□□□ 0.04
TNRC18O15417 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC18O15417 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC18O15417 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC18O15417 AC136475.9-201ENST00000605240 497 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC18O15417 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 Z98885.3-201ENST00000624882 1757 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNRC18O15417 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 AC017081.1-201ENST00000420063 823 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 AC006001.3-205ENST00000428370 579 ntBASIC15.28■□□□□ 0.04
TNRC18O15417 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TNRC18O15417 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNRC18O15417 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC18O15417 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNRC18O15417 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TNRC18O15417 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
TNRC18O15417 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TNRC18O15417 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC18O15417 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC18O15417 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TNRC18O15417 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms