Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DDO-201ENST00000368923 1953 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF444P1-201ENST00000559497 298 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AC091167.2-201ENST00000579581 588 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 NEK4P2-201ENST00000580004 1012 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AC073592.5-201ENST00000624854 528 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AC073111.5-205ENST00000641717 521 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 GOLGA8VP-201ENST00000559009 1798 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 DLX4-206ENST00000611342 1662 ntBASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 FAM8A6P-201ENST00000407496 1135 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 EHF-205ENST00000527935 557 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AC233263.1-201ENST00000578059 224 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AP005242.2-201ENST00000580065 1175 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms