Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
NACAE9PAV3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NACAE9PAV3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NACAE9PAV3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NACAE9PAV3 AC140479.7-201ENST00000636301 2332 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 C8orf49-201ENST00000525043 1968 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 AL157414.3-201ENST00000624276 1954 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 RRP7BP-205ENST00000566851 833 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.94□□□□□ -0.66
NACAE9PAV3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AL512384.1-201ENST00000406683 331 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 TTTY23B-201ENST00000442790 549 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC004066.1-201ENST00000502488 802 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.94□□□□□ -0.66
NACAE9PAV3 AL049840.4-201ENST00000602422 811 ntBASIC10.94□□□□□ -0.66
NACAE9PAV3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.94□□□□□ -0.66
NACAE9PAV3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.94□□□□□ -0.66
NACAE9PAV3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NACAE9PAV3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.93□□□□□ -0.66
NACAE9PAV3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.93□□□□□ -0.66
NACAE9PAV3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NACAE9PAV3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.93□□□□□ -0.66
NACAE9PAV3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NACAE9PAV3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
NACAE9PAV3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.93□□□□□ -0.66
NACAE9PAV3 KRT17P7-201ENST00000451704 1104 ntBASIC10.93□□□□□ -0.66
NACAE9PAV3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
NACAE9PAV3 RN7SL399P-201ENST00000471648 279 ntBASIC10.93□□□□□ -0.66
NACAE9PAV3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.93□□□□□ -0.66
NACAE9PAV3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms