Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 RBM8B-201ENST00000555532 525 ntBASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 RN7SL190P-201ENST00000582519 257 ntBASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 AC144522.1-201ENST00000625111 1658 ntBASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TBC1D3FA6NER0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ISCA2P1-201ENST00000425548 448 ntBASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 MIR3907-201ENST00000579424 151 ntBASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AL353726.2-201ENST00000623259 884 ntBASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 AC023157.3-201ENST00000619086 2088 ntBASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TBC1D3FA6NER0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AC007274.2-201ENST00000421675 662 ntBASIC14.68□□□□□ -0.06
TBC1D3FA6NER0 AL596276.2-201ENST00000447525 331 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms