Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 CLUHP2-201ENST00000426660 1303 ntBASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPDC1A2A3K4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.39■□□□□ 0.38
PTPDC1A2A3K4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 MTX1P1-201ENST00000440904 838 ntBASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 CNN2P10-201ENST00000443067 918 ntBASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 AC131206.1-201ENST00000538078 1211 ntBASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 EEF1DP1-201ENST00000585891 896 ntBASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 AL136172.1-201ENST00000598590 1394 ntBASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPDC1A2A3K4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC092135.3-201ENST00000624151 1846 ntBASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC011840.2-201ENST00000563063 1520 ntBASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 POM121L8P-201ENST00000417732 1281 ntBASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 POM121L9P-203ENST00000441984 1285 ntBASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 AC152010.1-201ENST00000415779 2006 ntBASIC17.38■□□□□ 0.37
PTPDC1A2A3K4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms