Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 NDUFB10P1-201ENST00000567319 521 ntBASIC19.75■□□□□ 0.75
PHF8Q9UPP1 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 EIF5AP2-201ENST00000585668 1047 ntBASIC19.75■□□□□ 0.75
PHF8Q9UPP1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF8Q9UPP1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 RNVU1-8-201ENST00000364272 125 ntBASIC19.74■□□□□ 0.75
PHF8Q9UPP1 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 RN7SL564P-201ENST00000496309 250 ntBASIC19.74■□□□□ 0.75
PHF8Q9UPP1 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF8Q9UPP1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 ACTG1P19-201ENST00000418987 1116 ntBASIC19.73■□□□□ 0.75
PHF8Q9UPP1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 PEBP1P2-201ENST00000603980 558 ntBASIC19.73■□□□□ 0.75
PHF8Q9UPP1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 DOC2GP-204ENST00000639052 2548 ntBASIC19.73■□□□□ 0.75
PHF8Q9UPP1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 AC067931.2-201ENST00000623655 2003 ntBASIC19.73■□□□□ 0.75
PHF8Q9UPP1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 LAP3P2-201ENST00000454686 1454 ntBASIC19.73■□□□□ 0.75
PHF8Q9UPP1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.73■□□□□ 0.75
PHF8Q9UPP1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms