Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 MIR661-201ENST00000384842 89 ntBASIC14.38□□□□□ -0.11
SNX6Q9UNH7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 AL138725.1-201ENST00000407347 1314 ntBASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX6Q9UNH7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC136759.1-202ENST00000530858 2194 ntBASIC14.37□□□□□ -0.11
SNX6Q9UNH7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC245100.3-201ENST00000441281 285 ntBASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 TERF1P3-201ENST00000505638 1227 ntBASIC14.37□□□□□ -0.11
SNX6Q9UNH7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC131206.1-201ENST00000538078 1211 ntBASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC190387.1-201ENST00000551683 408 ntBASIC14.37□□□□□ -0.11
SNX6Q9UNH7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX6Q9UNH7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX6Q9UNH7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms