Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL596257.1-201ENST00000641463 2694 ntBASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 AL592076.1-201ENST00000424448 303 ntBASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 AC103810.10-201ENST00000606504 343 ntBASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 AL627231.1-201ENST00000394467 1125 ntBASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 AP000358.1-201ENST00000456260 156 ntBASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNPO2Q9UMS6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 MTHFR-210ENST00000641407 2387 ntBASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.79■□□□□ 0.28
SYNPO2Q9UMS6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SYNPO2Q9UMS6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms