Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 RN7SL396P-201ENST00000471086 295 ntBASIC18.46■□□□□ 0.55
SCN11AQ9UI33 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 MIR4472-1-201ENST00000584349 80 ntBASIC18.46■□□□□ 0.55
SCN11AQ9UI33 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN11AQ9UI33 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCN11AQ9UI33 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCN11AQ9UI33 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCN11AQ9UI33 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.46■□□□□ 0.54
SCN11AQ9UI33 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 USP17L6P-201ENST00000382470 1197 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 STK24P1-201ENST00000455035 1291 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 CHCHD2P2-201ENST00000503744 321 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 SLC25A15P3-201ENST00000505530 290 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 PGAM1P12-201ENST00000505622 748 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 KRT8P18-201ENST00000413425 1445 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 AP001267.2-201ENST00000532619 2086 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 AC006529.1-201ENST00000459978 637 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 AC141586.1-203ENST00000567242 366 ntBASIC18.45■□□□□ 0.54
SCN11AQ9UI33 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN11AQ9UI33 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 AC103592.1-201ENST00000394513 664 ntBASIC18.44■□□□□ 0.54
SCN11AQ9UI33 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 C2orf69P1-201ENST00000563532 1093 ntBASIC18.44■□□□□ 0.54
SCN11AQ9UI33 SNORD3B-1-201ENST00000577988 758 ntBASIC18.44■□□□□ 0.54
SCN11AQ9UI33 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN11AQ9UI33 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN11AQ9UI33 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.43■□□□□ 0.54
SCN11AQ9UI33 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN11AQ9UI33 AC008741.2-201ENST00000612792 3115 ntBASIC18.43■□□□□ 0.54
SCN11AQ9UI33 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN11AQ9UI33 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms