Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 TBC1D27-202ENST00000424239 1573 ntBASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RIMBP3Q9UFD9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 CLK2P1-201ENST00000416636 1294 ntBASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 CD37-203ENST00000426897 1204 ntTSL 2 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 GOLGA2P10-201ENST00000550961 817 ntBASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 GAPDHP65-201ENST00000425487 1006 ntBASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 PDPN-208ENST00000509009 571 ntTSL 4 BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 AC008622.3-201ENST00000621170 600 ntBASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RIMBP3Q9UFD9 CCT8L1P-201ENST00000465400 1674 ntBASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 TMEM256P1-201ENST00000430550 340 ntBASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 OARD1-214ENST00000486443 764 ntTSL 3 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
RIMBP3Q9UFD9 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 APRT-202ENST00000426324 664 ntTSL 2 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 RPL3P9-201ENST00000463217 1183 ntBASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 AC132825.4-202ENST00000578792 434 ntBASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC22.33■■□□□ 1.17
RIMBP3Q9UFD9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RIMBP3Q9UFD9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 PARVG-208ENST00000466375 820 ntTSL 2 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.32■■□□□ 1.16
RIMBP3Q9UFD9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 HNRNPA1P68-201ENST00000425806 979 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 HNRNPA1P3-201ENST00000440968 551 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms