Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL355864.2-201ENST00000447420 863 ntBASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 RN7SL752P-201ENST00000463779 287 ntBASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 AC011495.1-201ENST00000498085 584 ntBASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS29Q9UBQ0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS29Q9UBQ0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AP001889.1-201ENST00000525414 633 ntBASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 AC215219.1-201ENST00000400706 1817 ntBASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS29Q9UBQ0 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AC139712.1-201ENST00000378256 1875 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AP000593.2-201ENST00000542775 1433 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AC005229.1-201ENST00000392885 409 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AC007389.4-201ENST00000454674 793 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AC106760.1-201ENST00000508690 800 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 ALG3P1-201ENST00000508806 1114 ntBASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.19□□□□□ -0.14
VPS29Q9UBQ0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms