Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 KRT8P14-201ENST00000414254 1442 ntBASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATAD3AQ9NVI7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 C1QBPP1-201ENST00000400117 770 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AL442647.2-201ENST00000429864 857 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC114812.1-204ENST00000449669 728 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC022616.1-201ENST00000518688 554 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC009118.2-201ENST00000613275 655 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 AC015802.1-201ENST00000588104 1449 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 HSPA7-201ENST00000445535 1927 ntBASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.31□□□□□ -0.12
ATAD3AQ9NVI7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 SOCS2P1-201ENST00000417727 557 ntBASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 AC093726.1-201ENST00000608064 963 ntBASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.3□□□□□ -0.12
ATAD3AQ9NVI7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms