Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AL645937.2-201ENST00000396808 931 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 API5-211ENST00000534695 560 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC123567.1-201ENST00000548294 1261 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC007431.3-201ENST00000623221 587 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 CLK3P2-201ENST00000427566 1453 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 AGGF1P1-201ENST00000509500 2073 ntBASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.38□□□□□ -0.43
LIN7CQ9NUP9 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 MST1P2-201ENST00000457982 2291 ntBASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 TP53TG3HP-202ENST00000569755 579 ntBASIC12.37□□□□□ -0.43
LIN7CQ9NUP9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms