Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AC087386.2-201ENST00000623212 4637 ntBASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AL157414.3-201ENST00000624276 1954 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 NUTM2HP-201ENST00000442076 2498 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AC004945.1-201ENST00000416738 983 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AC011495.1-201ENST00000498085 584 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AL133215.2-201ENST00000609242 977 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCM2LQ9NUG4 AC087499.5-201ENST00000452760 1342 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms