Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 SALL4P5-201ENST00000419001 1760 ntBASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 AC091951.1-201ENST00000512854 2465 ntBASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF304Q9HCX3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 MYO15B-237ENST00000642007 4893 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SNX18-202ENST00000343017 3140 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC107918.4-201ENST00000641966 3141 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 POM121L4P-202ENST00000427789 1891 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 RN7SKP230-201ENST00000365642 335 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 HIST2H2BB-201ENST00000449108 381 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 MIR4683-201ENST00000579659 81 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC104982.3-201ENST00000581995 514 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AL118558.3-201ENST00000607414 1079 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC023157.3-201ENST00000619086 2088 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 ACE3P-201ENST00000423435 1973 ntBASIC14.13□□□□□ -0.15
ZNF304Q9HCX3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 AC003102.2-201ENST00000589195 1469 ntBASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 CICP23-201ENST00000605013 2741 ntBASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 AC092384.3-202ENST00000564646 2873 ntBASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF304Q9HCX3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms