Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM8A4P-201ENST00000435433 1213 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 RN7SL692P-201ENST00000464677 288 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SORD2P-201ENST00000558556 1069 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ECM1P1-201ENST00000604092 1279 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 LINC01230-201ENST00000625222 3017 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AL359881.3-201ENST00000602640 1721 ntBASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
BRF2Q9HAW0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AL928921.2-201ENST00000641325 2442 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AL512384.1-201ENST00000406683 331 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC004945.1-201ENST00000416738 983 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AL596325.1-201ENST00000563991 1082 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC008735.3-201ENST00000596646 500 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AC009093.2-202ENST00000620513 2079 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 CU639417.3-201ENST00000624240 1404 ntBASIC14.14□□□□□ -0.15
BRF2Q9HAW0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.14□□□□□ -0.15
BRF2Q9HAW0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms