Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 AC242376.1-201ENST00000559033 726 ntBASIC14.58□□□□□ -0.08
HDAC8Q9BY41 MIR4754-201ENST00000582477 89 ntBASIC14.58□□□□□ -0.08
HDAC8Q9BY41 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HDAC8Q9BY41 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CICP14-201ENST00000629111 2732 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AC073150.1-201ENST00000450406 1084 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 RN7SL258P-201ENST00000478664 300 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AGGF1P1-201ENST00000509500 2073 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 FRMPD2B-201ENST00000431305 1347 ntBASIC14.57□□□□□ -0.08
HDAC8Q9BY41 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HDAC8Q9BY41 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms