Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 RN7SKP175-201ENST00000408472 289 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC004945.1-201ENST00000416738 983 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 RPSAP36-202ENST00000494591 1261 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AP003171.2-201ENST00000528208 925 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC243960.2-201ENST00000600996 747 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 AC011840.2-201ENST00000563063 1520 ntBASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AC023090.2-201ENST00000625182 2110 ntBASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 HIST2H2BB-201ENST00000449108 381 ntBASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AL022328.3-201ENST00000607943 679 ntBASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AC002472.3-201ENST00000640124 621 ntBASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms