Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN18Q99952 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN18Q99952 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTPN18Q99952 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN18Q99952 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.6■□□□□ 0.25
PTPN18Q99952 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC090136.2-201ENST00000517809 420 ntBASIC16.6■□□□□ 0.25
PTPN18Q99952 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.6■□□□□ 0.25
PTPN18Q99952 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC008972.2-201ENST00000606587 494 ntBASIC16.6■□□□□ 0.25
PTPN18Q99952 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTPN18Q99952 ENPP7P8-202ENST00000527856 1345 ntBASIC16.6■□□□□ 0.25
PTPN18Q99952 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN18Q99952 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN18Q99952 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN18Q99952 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN18Q99952 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 PTGER4P2-201ENST00000328411 252 ntBASIC16.59■□□□□ 0.25
PTPN18Q99952 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN18Q99952 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 PTGER4P3-201ENST00000458150 252 ntBASIC16.59■□□□□ 0.25
PTPN18Q99952 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN18Q99952 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 AC092862.1-201ENST00000541534 533 ntBASIC16.59■□□□□ 0.25
PTPN18Q99952 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN18Q99952 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN18Q99952 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.59■□□□□ 0.25
PTPN18Q99952 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 AL021707.6-201ENST00000609212 491 ntBASIC16.59■□□□□ 0.25
PTPN18Q99952 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.59■□□□□ 0.25
PTPN18Q99952 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PTPN18Q99952 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN18Q99952 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN18Q99952 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN18Q99952 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PTPN18Q99952 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PTPN18Q99952 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.58■□□□□ 0.25
PTPN18Q99952 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PTPN18Q99952 AL365203.3-201ENST00000609742 2057 ntBASIC16.58■□□□□ 0.25
PTPN18Q99952 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms