Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 KRT8P28-201ENST00000433288 1390 ntBASIC12.29□□□□□ -0.44
GAFA1Q96PS6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GAFA1Q96PS6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AC097376.2-205ENST00000610159 5334 ntBASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AL035414.1-201ENST00000451327 857 ntBASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 RN7SL560P-201ENST00000577943 264 ntBASIC12.28□□□□□ -0.44
GAFA1Q96PS6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AL008721.1-201ENST00000609964 604 ntBASIC12.28□□□□□ -0.44
GAFA1Q96PS6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAFA1Q96PS6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 AC007191.1-201ENST00000623179 2995 ntBASIC12.27□□□□□ -0.44
GAFA1Q96PS6 AC015818.8-201ENST00000587907 1519 ntBASIC12.27□□□□□ -0.44
GAFA1Q96PS6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAFA1Q96PS6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms