Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR6799-201ENST00000620297 69 ntBASIC15.26■□□□□ 0.03
RPRD1AQ96P16 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 MIR663B-201ENST00000408361 115 ntBASIC15.25■□□□□ 0.03
RPRD1AQ96P16 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AL354877.1-201ENST00000424412 413 ntBASIC15.25■□□□□ 0.03
RPRD1AQ96P16 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 DUX4L46-201ENST00000566845 751 ntBASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPRD1AQ96P16 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC015656.1-201ENST00000624209 3578 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC104306.2-201ENST00000451877 341 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 FAM8A2P-201ENST00000528813 1142 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 AC023824.1-201ENST00000562945 2975 ntBASIC15.24■□□□□ 0.03
RPRD1AQ96P16 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPRD1AQ96P16 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms