Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC106886.1-201ENST00000568660 600 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AL358472.3-201ENST00000608147 415 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC027601.3-201ENST00000622907 509 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 BEND3P1-201ENST00000421591 1944 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AC064801.2-201ENST00000625052 1303 ntBASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AL354989.2-201ENST00000435838 1540 ntBASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 RHOXF1P1-202ENST00000635473 501 ntBASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
PDLIM5Q96HC4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PDLIM5Q96HC4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms