Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 BRI3P1-201ENST00000440440 378 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 PTGER4P3-201ENST00000458150 252 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AC090136.2-201ENST00000517809 420 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 FTLP5-201ENST00000586853 534 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AL133467.4-201ENST00000602953 725 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AC008972.2-201ENST00000606587 494 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 MIR6816-201ENST00000620368 66 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AL591471.1-201ENST00000621855 229 ntBASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM43Q96BQ3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 AC092135.3-201ENST00000624151 1846 ntBASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRIM43Q96BQ3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC013553.1-201ENST00000560906 267 ntBASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC023024.2-201ENST00000623561 1993 ntBASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM43Q96BQ3 FUCA1P1-201ENST00000374476 1351 ntBASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM43Q96BQ3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms